From a statistical stand point, it is difficult to compare Kobe and Jordan based on the following reasons:
1) Kobe came straight out of high school and didn't hit his prime until his fourth year, while Jordan hit the ground running.
2) They played in massively different era; Kobe in an era where perimeter threat is the way to go (other than Stoudemire, and earlier on, Shaq, most of the top-10 scorers year-in-year out are perimeter threats. Jordan on the other hand, played in an era that was still post dominated (Malone, Olajuwon, Barkley, Ewing, Robinson, Shaq later on, McHale, Aguirre).
3) Rules were different, hand checks were thrown out, but defensive schemes were more complex.
But these differences aside, the statistics would give a brief look at how they compared to each other.
I took out Kobe's worse seasons, and only used his numbers from 2000 to 2008, a total of 9 seasons, and then took Jordan's nine best statistical seasons (1987 to 1993, 96 and 97). The reason is because Kobe's numbers the 1st 3 seasons were his "college" days, and Jordan took a couple of years off for baseball).
I then took per 36 minute production of the two. The reason is because some players play more than others, and given that these two are such top conditioned athletes and they played close to / more than 36 minutes a game anyways, we don't have to worry about them running out of gas and see production drops.
The result is as follows:
MJ is better than Kobe in:
Rebounds (19%)
Assists (8%)
Steals (57%)
Blocks (60%)
Turnovers (-1%)
Fouls (-5%)
Points (18%)
FG% (5.7%)
3P% (0.4%)
FT% (0.1%)
Kobe was better than Jordan in 3PA and 3PM by almost 90%.
I was shocked by the results, especially those around 3P%, but it seems like both are about equal during their prime years, and Jordan improved his 3P% dramatically as his career progresses, and had the highest 3P% in the years where he made most of his attempts (something about shot selection).
It comes as no surprise that Kobe made more 3pters as this is an era when 3pt shooting has matured into a serious weapon, while in the 80's, and even the early 90's, the shot was nothing more than a gimmick and an option for a team to come back in a high-risk/high-reward maner.
From an accomplishment stand point, in the years I used to compare the two, Jordan won:
1 DPoY
5 MVPs
5 Finals MVP (I had to throw out 98, because it was the last season of Jordan's prime)
9 All-NBA 1st teams
8 All-D 1st teams
Won 5 les as the main man.
Led the league in scoring 9 times
Finished 8th in assists once
Led the league in steals 3 times, and top 10 another 5 times
For Kobe Bryant, he won:
1 MVP
All NBA 1st team 6 times
All NBA 2nd team twice
All NBA 3rd team once
All D 1st team 6 times
All D 2nd team twice
Led the league in scoring twice
Finishing top 10 in scoring another 6 times
Finished top 10 in steals 3 times
Won 3 les as the 2nd best player on the team.
So from both a statistical point of view and from an accomplishment point of view, Jordan dwarfed Kobe in their respective 9 years of prime. Unless Kobe can drastically improve over the next 5 or 6 years, which means that he will go into his "real" prime after playing for 12 seasons, which in itself is extremely rare, Kobe has no chance of catching Jordan.